LncRNA:ENSG00000228630

Official Symbol

HOTAIR  provided by HGNC

Official Full Name

HOX transcript antisense RNA 

Gene ID

100124700 

Chromosome

chr12

Start Site

53962308

End Site

53974956

Strand

Assembly

GRCh38

Biotype

lncRNA

Also known as

HOXAS|HOXC-AS4|HOXC11-AS1|NCRNA00072 

Summary

This gene is located within the Homeobox C (HOXC) gene cluster on chromosome 12 and is co-expressed with the HOXC genes. It functions through an RNA product, which binds lysine specific demethylase 1 (LSD1) and Polycomb repressive complex 2 (PRC2), and serves as a scaffold to assemble these regulators at the HOXD gene cluster, thereby promoting epigenetic repression of HOXD. This gene is highly expressed in multiple tumors. Alternatively spliced transcript variants have been identified. [provided by RefSeq, Feb 2019] 

M6ARegulator:ENSG00000149658

Official Symbol

YTHDF1  provided by HGNC

Official Full Name

YTH N6-methyladenosine RNA binding protein 1 

m6A Category

readers 

Gene ID

54915 

Chromosome

chr20 

Start Site

63195429 

End Site

63216139 

Strand

Assembly

GRCh38

Biotype

protein coding 

Also known as

C20orf21|DF1 

Summary

NA 

Differentially expressed Detail
Symbol HOTAIR  YTHDF1 
Pvalue 7.3e-06  1.3e-01 
Log2FC 1.4e+00  8.5e-02 
Significant UP REGULATED  NOT SIGNIFICANT 
Correlation coefficient 0.45 
Correlation FDR 5.9e-15