LncRNA:ENSG00000251562

Official Symbol

MALAT1  provided by HGNC

Official Full Name

metastasis associated lung adenocarcinoma transcript 1 

Gene ID

378938 

Chromosome

chr11

Start Site

65497688

End Site

65506516

Strand

Assembly

GRCh38

Biotype

lncRNA

Also known as

HCN|LINC00047|NCRNA00047|NEAT2|PRO2853 

Summary

This gene produces a precursor transcript from which a long non-coding RNA is derived by RNase P cleavage of a tRNA-like small ncRNA (known as mascRNA) from its 3' end. The resultant mature transcript lacks a canonical poly(A) tail but is instead stabilized by a 3' triple helical structure. This transcript is retained in the nucleus where it is thought to form molecular scaffolds for ribonucleoprotein complexes. It may act as a transcriptional regulator for numerous genes, including some genes involved in cancer metastasis and cell migration, and it is involved in cell cycle regulation. Its upregulation in multiple cancerous tissues has been associated with the proliferation and metastasis of tumor cells. [provided by RefSeq, Mar 2015] 

M6ARegulator:ENSG00000146457

Official Symbol

WTAP  provided by HGNC

Official Full Name

WT1 associated protein 

m6A Category

writers 

Gene ID

9589 

Chromosome

chr6 

Start Site

159725585 

End Site

159756319 

Strand

Assembly

GRCh38

Biotype

protein coding 

Also known as

Mum2 

Summary

"The Wilms tumor suppressor gene WT1 appears to play a role in both transcriptional and posttranscriptional regulation of certain cellular genes. This gene encodes a WT1-associating protein, which is a ubiquitously expressed nuclear protein. Like WT1 protein, this protein is localized throughout the nucleoplasm as well as in speckles and partially colocalizes with splicing factors. Alternative splicing of this gene results in several transcript variants encoding three different isoforms. [provided by RefSeq, Jul 2012]" 

Differentially expressed Detail
Symbol MALAT1  WTAP 
Pvalue 3.1e-15  2.7e-05 
Log2FC 1.6e+00  3.9e-01 
Significant UP REGULATED  NOT SIGNIFICANT 
Correlation coefficient 0.46 
Correlation FDR 6.9e-20