LncRNA:ENSG00000213599

Official Symbol

SLX1A-SULT1A3  provided by HGNC

Official Full Name

SLX1A-SULT1A3 readthrough (NMD candidate) 

Gene ID

100526830 

Chromosome

chr16

Start Site

30193892

End Site

30204310

Strand

Assembly

GRCh38

Biotype

lncRNA

Also known as

HAST3|M-PST|ST1A3|STM|SULT1A3|TL-PST 

Summary

This locus represents naturally occurring read-through transcription between the neighboring SLX1A (SLX1 structure-specific endonuclease subunit homolog A) and SULT1A3 (sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3) genes on the short arm of chromosome 16. A duplicate read-through locus also exists between the SLX1B and SULT1A4 genes located approximately 730 kb upstream on the same chromosome. The read-through transcript is a candidate for nonsense-mediated mRNA decay (NMD), and is thus unlikely to produce a protein product. [provided by RefSeq, Feb 2017] 

M6ARegulator:ENSG00000092199

Official Symbol

HNRNPC  provided by HGNC

Official Full Name

heterogeneous nuclear ribonucleoprotein C 

m6A Category

readers 

Gene ID

3183 

Chromosome

chr14 

Start Site

21209136 

End Site

21269494 

Strand

Assembly

GRCh38

Biotype

protein coding 

Also known as

C1|C2|HNRNP|HNRPC|SNRPC 

Summary

"This gene belongs to the subfamily of ubiquitously expressed heterogeneous nuclear ribonucleoproteins (hnRNPs). The hnRNPs are RNA binding proteins and they complex with heterogeneous nuclear RNA (hnRNA). These proteins are associated with pre-mRNAs in the nucleus and appear to influence pre-mRNA processing and other aspects of mRNA metabolism and transport. While all of the hnRNPs are present in the nucleus, some seem to shuttle between the nucleus and the cytoplasm. The hnRNP proteins have distinct nucleic acid binding properties. The protein encoded by this gene can act as a tetramer and is involved in the assembly of 40S hnRNP particles. Multiple transcript variants encoding at least two different isoforms have been described for this gene. [provided by RefSeq, Jul 2008]" 

Differentially expressed Detail
Symbol SLX1A-SULT1A3  HNRNPC 
Pvalue Not Available  Not Available 
Log2FC Not Available  Not Available 
Significant Not Available  Not Available 
Correlation coefficient 0.47 
Correlation FDR 7.2e-08