LncRNA:ENSG00000242808

Official Symbol

SOX2-OT  provided by HGNC

Official Full Name

SOX2 overlapping transcript 

Gene ID

347689 

Chromosome

chr3

Start Site

180989762

End Site

181836880

Strand

Assembly

GRCh38

Biotype

lncRNA

Also known as

NCRNA00043|SOX2OT 

Summary

This gene produces alternatively spliced long non-coding RNAs. These RNAs were observed to be upregulated in tumor cells and positively correlated to expression of the SRY-box 2 gene. Overexpression of these transcripts may promote cell proliferation. [provided by RefSeq, Dec 2017] 

M6ARegulator:ENSG00000092199

Official Symbol

HNRNPC  provided by HGNC

Official Full Name

heterogeneous nuclear ribonucleoprotein C 

m6A Category

readers 

Gene ID

3183 

Chromosome

chr14 

Start Site

21209136 

End Site

21269494 

Strand

Assembly

GRCh38

Biotype

protein coding 

Also known as

C1|C2|HNRNP|HNRPC|SNRPC 

Summary

"This gene belongs to the subfamily of ubiquitously expressed heterogeneous nuclear ribonucleoproteins (hnRNPs). The hnRNPs are RNA binding proteins and they complex with heterogeneous nuclear RNA (hnRNA). These proteins are associated with pre-mRNAs in the nucleus and appear to influence pre-mRNA processing and other aspects of mRNA metabolism and transport. While all of the hnRNPs are present in the nucleus, some seem to shuttle between the nucleus and the cytoplasm. The hnRNP proteins have distinct nucleic acid binding properties. The protein encoded by this gene can act as a tetramer and is involved in the assembly of 40S hnRNP particles. Multiple transcript variants encoding at least two different isoforms have been described for this gene. [provided by RefSeq, Jul 2008]" 

Differentially expressed Detail
Symbol SOX2-OT  HNRNPC 
Pvalue 3.3e-11  5.4e-01 
Log2FC -7.5e-01  2.3e-02 
Significant NOT SIGNIFICANT  NOT SIGNIFICANT 
Correlation coefficient 0.42 
Correlation FDR 2.4e-22