LncRNA:ENSG00000268388

Official Symbol

FENDRR  provided by HGNC

Official Full Name

FOXF1 adjacent non-coding developmental regulatory RNA 

Gene ID

400550 

Chromosome

chr16

Start Site

86474529

End Site

86509099

Strand

Assembly

GRCh38

Biotype

lncRNA

Also known as

FOXF1-AS1|FOXF1AS1|TCONS_00024240|lincFOXF1|onco-lncRNA-21 

Summary

This gene produces a spliced long non-coding RNA transcribed bidirectionally with FOXF1 on the opposite strand. A similar gene in mouse is essential for normal development of the heart and body wall. The encoded transcript is thought to act by binding to polycomb repressive complex 2 (PRC2) and/or TrxG/MLL complexes to promote the methylation of the promoters of target genes, thus reducing their expression. It has been suggested that this transcript may play a role in the progression of gastric cancer. Alternatively spliced transcript variants have been identified. [provided by RefSeq, Mar 2015] 

M6ARegulator:ENSG00000047188

Official Symbol

YTHDC2  provided by HGNC

Official Full Name

YTH domain containing 2 

m6A Category

readers 

Gene ID

64848 

Chromosome

chr5 

Start Site

113513694 

End Site

113595285 

Strand

Assembly

GRCh38

Biotype

protein coding 

Also known as

CAHL|hYTHDC2 

Summary

"This gene encodes a member of the DEAH (Asp-Glu-Ala-His) subfamily of proteins, part of the DEAD (Asp-Glu-Ala-Asp) box family of RNA helicases. The encoded protein binds to N6-methyladenosine, a common modified RNA nucleotide that is enriched in the stop codons and 3' UTRs of eukaryotic messenger RNAs. Binding of proteins to this modified nucleotide may regulate mRNA translation and stability. This gene may be associated with susceptibility to pancreatic cancer in human patients, and knockdown of this gene resulted in reduced proliferation in a human liver cancer cell line. [provided by RefSeq, Sep 2016]" 

Differentially expressed Detail
Symbol FENDRR  YTHDC2 
Pvalue 9.0e-02  5.7e-01 
Log2FC -1.3e+00  -1.3e-01 
Significant NOT SIGNIFICANT  NOT SIGNIFICANT 
Correlation coefficient 0.31 
Correlation FDR 7.1e-05