LncRNA:ENSG00000269821

Official Symbol

KCNQ1OT1  provided by HGNC

Official Full Name

KCNQ1 opposite strand/antisense transcript 1 

Gene ID

10984 

Chromosome

chr11

Start Site

2608328

End Site

2699994

Strand

Assembly

GRCh38

Biotype

lncRNA

Also known as

KCNQ1-AS2|KCNQ10T1|Kncq1|KvDMR1|KvLQT1-AS|LIT1|NCRNA00012 

Summary

Human chromosomal region 11p15.5 contains two clusters of epigenetically-regulated genes that are expressed from only one chromosome in a parent-of-origin manner. Each cluster, or imprinted domain, is regulated by a functionally independent imprinting control region (ICR). The human CDKN1C/KCNQ1OT1 domain is regulated by an ICR located in an intron of KCNQ1, and contains at least eight genes that are expressed exclusively or preferentially from the maternally-inherited allele. The DNA of the ICR is specifically methylated on the maternally-inherited chromosome, and unmethylated on the paternally-inherited chromosome. The ICR contains the promoter of the KCNQ1OT1 gene that is exclusively expressed from the paternal allele. The KCNQ1OT1 transcript is the antisense to the KCNQ1 gene and is a unspliced long non-coding RNA. It interacts with chromatin and regulates transcription of multiple target genes through epigenetic modifications. The transcript is abnormally expressed from both chromosomes in most patients with Beckwith-Wiedemann syndrome, and the transcript also plays an important role in colorectal carcinogenesis. [provided by RefSeq, Apr 2012] 

M6ARegulator:ENSG00000146457

Official Symbol

WTAP  provided by HGNC

Official Full Name

WT1 associated protein 

m6A Category

writers 

Gene ID

9589 

Chromosome

chr6 

Start Site

159725585 

End Site

159756319 

Strand

Assembly

GRCh38

Biotype

protein coding 

Also known as

Mum2 

Summary

"The Wilms tumor suppressor gene WT1 appears to play a role in both transcriptional and posttranscriptional regulation of certain cellular genes. This gene encodes a WT1-associating protein, which is a ubiquitously expressed nuclear protein. Like WT1 protein, this protein is localized throughout the nucleoplasm as well as in speckles and partially colocalizes with splicing factors. Alternative splicing of this gene results in several transcript variants encoding three different isoforms. [provided by RefSeq, Jul 2012]" 

Differentially expressed Detail
Symbol KCNQ1OT1  WTAP 
Pvalue Not Available  Not Available 
Log2FC Not Available  Not Available 
Significant Not Available  Not Available 
Correlation coefficient 0.62 
Correlation FDR 1.4e-08